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| The
Yeast Intein Database |
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The Yeast Intein Database is a comprehensive
and curated database devoted to yeast inteins.
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| Inteins
are self-catalytic protein splicing elements. The Yeast Intein Database
and Registry, is a curated compilation of published and unpublished
information about protein splicing. It presents general information
as well as detailed data for each yeast intein, including tabulated
comparisons and a comprehensive bibliography. An intein-specific BLAST
server is now available to assist in identifying new inteins. |
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| Intein
Name |
Dhan GLT1
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| Intein
id |
YSTIN012 |
| Intein
Class |
Theoretical
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| Prototype
Allele |
Dhan GLT1
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| Organism
Name |
Debaryomyces hansenii CBS767 |
| Exiein
Name |
Glutamate synthase |
| Intein
Class |
Theoretical |
| Organism
Description |
Fungi, Anamorph: Candida famata, taxon:4959 |
| Domain
of Life |
Eucarya |
| Endonuclease
Activity |
-- |
| Endonuclease
Motif |
DOD |
| Location
in Extein |
R1183 |
| Inert
Site Comment |
GLT1-a |
| Intein
Size |
607 |
| Intein
N Terminal |
IALGCIMMRR/C |
| Intein
C Terminal |
AN/CHLNTCPVGI |
| Accession
No |
AAW82371.1 in NCBI/protein, GLT1 |
| Intein
aa Sequence |
>gi|58761325|gb|AAW82371.1|[58761325] Dhan GLT1 intein (including -1 and +1 extein residues)
RCLASDTLVRTSEGDKPVAEVAIGDYLLDAEDKPVLCMGANPSQTGRMKEIAYQDFDSKKRVSFKCTPDHHLELTLTDST
PSLSGKSVTWFSRCTGAHLSEEVSEVYLDNMVSIFYNDLVDSTDSAVDKDSIHEAVDLALEDHYHRGNSDQYSIHLNEYI
SRIADKELQNEPEFIRECIHDAANRFVITSSGNRNIKSESFDDKLLLSRSRSSTADSDSDYVITDASVHSHSNNSSVYLA
SPDSMIPDGAANRFENIASKLKEPVCNCGGIRKIFRSFGTTEDAELAYSLLLSEHYYRLDPRFVTDGYTFQASVEQYENM
CSQEVQNMHLKLYRSPLKFVEREHNSAELPVDPYFLGLWLGDGDSSGTTIMTTDREIVVWLNSYVERLNQNKPEGCFPLK
LTEQLIYGAGHTSKSGHTTKVDVRNYKISSGDAFVRSGTYWNPIFDGLKKLGLLNNKSAGIPQEYMNSDEQNRLSVIAGL
MDSDGCYVKSHNTYRFTQLTEDHKKIVYDLKELALSCGINTTGVELSVKPLGFNKHKHSTEYVVYLGNGSQKFQELLLLP
RKKMEISKKHVSLDARPFTVSDVEDGEFRAIEVSGGVFQLANRLVVANC |
| Block
A |
CLASDTLVRTSEG 13 |
| Block
B |
RVSFKCTPDHHLEL 73 |
| Block
C |
LGLWLGDGD 363 |
| Block
D |
NQNKPEGC 395 |
| Block
E |
VIAGLMDSDG 484
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| Block
H |
EDHKKIVYDLKELALSCGI 518 |
| Block
F |
EDGEFRAIEVSGGVFQ 599 |
| Block
G |
NRLVVANC 608
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| Contributed
by |
Fran Perler |
| Comments |
Block B may be TWFSRCTGAHLSEE 102 |
| References |
-- |
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Please
send comments and suggestions to curator at: curator@ibibiosolutions.com
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Developed
at the Bioinformatics Research Laboratory
of IBI Biosolutions Pvt. Ltd.
Copyright
© IBI Biosolutions Pvt. Ltd.. (2008).
For problems or questions regarding this Web site contact us at: curator@ibibiosolutions.com
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