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The
Restriction EnzyBase Project
Bioinformatics Research Lab.
IBI Biosolutions Pvt. Ltd., India
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IBI Biosolutions Pvt. Ltd.
www.ibibiosolutions.com
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REB References
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Roberts,
R.J., Vincze, T., Posfai, J., Macelis, D., (2007), REBASE-enzymes
and genes for DNA restriction and modification. Nucleic
Acid Res., 35, D269-D270.
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Bair
CL, Black LW. (2007 Feb 23) type IV modification dependent
restriction nuclease that targets glucosylated hydroxymethyl
cytosine modified DNAs.. J Mol Biol.;366(3):768-78.
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Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.,
(2005), REBASE-restriction enzymes and methyltransferases.
Nucleic Acid Res., 33, D230-D232..
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Semenova
E, Minakhin L, Bogdanova E, Nagornykh M, Vasilov A,
Heyduk T, Solonin A, Zakharova M, Severinov K. (2005)
Transcription regulation of the EcoRV restriction-modification
system Nucleic Acids Res., 33(21): 6942-6951.
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Ichige A, Kobayashi I(2005)-Stability of EcoRI restriction-modification
enzymes in vivo differentiates the EcoRI restriction-modification
system from other postsegregational cell killing systems.Ichige
A, Kobayashi I. J Bacteriol.; 187(19): 6612-6621
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Richard
J. Roberts, Marlene Belfort1, Timothy Bestor2, Ashok
S. Bhagwat3, Thomas A. Bickle4, Jurate Bitinaite, Robert
M. Blumenthal5, Sergey Kh. Degtyarev6, David T. F. Dryden7,
Kevin Dybvig8, Keith Firman9, Elizaveta S. Gromova10,
Richard I. Gumport11, Stephen E. Halford12, Stanley
Hattman13, Joseph Heitman14, David P. Hornby15, Arvydas
Janulaitis16, Albert Jeltsch17, Jytte Josephsen18, Antal
Kiss19, Todd R. Klaenhammer20, Ichizo Kobayashi21, Huimin
Kong, Detlev H. Krüger22, Sanford Lacks23, Martin
G. Marinus24, Michiko Miyahara25, Richard D. Morgan,
Noreen E. Murray26, Valakunja Nagaraja27, Andrzej Piekarowicz28,
Alfred Pingoud17, Elisabeth Raleigh, Desirazu N. Rao27,
Norbert Reich29, Vladimir E. Repin30, Eric U. Selker31,
Pang-Chui Shaw32, Daniel C. Stein33, Barry L. Stoddard34,
Waclaw Szybalski35, Thomas A. Trautner36, James L. Van
Etten37, Jorge M. B. Vitor38, Geoffrey G. Wilson and
Shuang-yong Xu- Press-(2003)A nomenclature for restriction
enzymes, DNA methyltransferases, homing endonucleases
and their genes.Nucleic Acids Research, Vol. 31, No.
7 1805-1812
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Sadykov M, Asami Y, Niki H, Handa N, Itaya M, Tanokura
M, Kobayashi I.(2003)-Multiplication of a restriction-modification
gene complex . Molecular Microbiology. Volume 48 Issue
2 Page 417
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Takahashi
N, Naito Y, Handa N, Kobayashi I.(2002)A DNA methyltransferase
can protect the genome from postdisturbance attack by
a restriction-modification gene complex.J Bacteriol.
Nov;184(22):6100-8
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Kobayashi
I- (2001)Behavior of restriction-modification systems
as selfish mobile elements and their impact on genome
evolution. Nucleic Acids Res. ;29(18):3742-56
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1Kusano
K, Naito T, Handa N, Kobayashi I. Restriction-modification
systems as genomic parasites in competition for specific
sequences.Proc Natl Acad Sci U S A. 1995 Nov 21;92(24):11095-9.
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Murray,N.E.
(2000) Type I restriction systems: sophisticated molecular
machines. Microbiol. Mol. Biol. Rev., 64, 412-43
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Jeltsch
A, Pingoud A(1996 Feb) -Horizontal gene transfer contributes
to the wide distribution and evolution of type II restriction-modification
systems. : J Mol Evol.;42(2):91-6
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Naito
T, Kusano K, Kobayashi I(1995 Feb) .Selfish behavior
of restriction-modification systems.-Science. 10;267(5199):897-9
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A,
Kobayashi I.- Stability of EcoRI restriction-modification
enzymes in vivo differentiates the EcoRI restriction-modification
system from other postsegregational cell killing systems.Ichige-
Department of Medical Genome Sciences, Institute of
Medical Science, The University of Tokyo, 4-6-1 Shirokanedai,
Minato-ku, Tokyo 108-8639, Japan.
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Lyn
Sue Kahng and Lucy Shapiro- The CcrM DNA Methyltransferase
of Agrobacterium tumefaciens Is Essential, and Its Activity
Is Cell Cycle Regulated. -Department of Developmental
Biology1 and Division of Gastroenterology, Department
of Internal Medicine,2 Stanford University School of
Medicine, Stanford, California.
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Titheradge,A.J.,
King,J., Ryu,J. and Murray,N.E.- Families of restriction
enzymes: an analysis prompted by molecular and genetic
data for type ID restriction and modification systems.
Nucleic Acids Res., 29, 4195-4205.
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