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Knowledge
of complete virus genome sequences helps biologists to develop a
fundamental understanding of viral replication and host pathogen
interactions. However, the consistence analysis of viral proteins
in the absence of many of today's bioinformatics approaches has
resulted in the level of organization and annotation of viral genome
sequence consistence to grow. Additional complete protein sequences
can be retrieve a single FASTA format files for easy import into
other sequence analysis program. The protein families are a rich
source of information for functional and evolutionary studies and
the alignment of conserved sequences regions facilitate the direct
study of construction of sequence profile.
The Leukemia Virus Database (LeuBase), a knowledge-base of leukemia
virus genes and proteins that contains detailed information of the
genes and predicted protein sequences from 7 completely sequenced
genomes (Abelson murine leukemia virus; Bovine leukemia virus;
Feline leukemia virus; Friend leukemia virus; Gibbon ape leukemia
virus; Molony murine leukemia virus; Rauscher murine leukemia virus).
Out of 7 genomes of leukemia virus, the one genome (Bovine leukemia
virus) has shown the maximum length i.e. about 81419 nt long
and one virus (Feline leukemia virus) has shown approximately
53 CDs in the genome, it was predicted on the basis of Open Reading
Frame (ORF's). The database contains the information of DNA sequence,
protein sequence, length of DNA & protein sequence and G+C%.
For each family (gag, pol, env), an alignment of the conserved regions,
functional and taxonomy information, and links to DNA & Protein
sequences is retrieved through this database.
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