Comparative Genome Analysis and Development of Database System
for Apple Mosaic Virus; RNA1, RNA2, RNA3
and
Apple Chlorotic Leaf Spot Virus strain P863

Home Page
Apple Mosaic Virus
Apple Chlorotic leaf Spot Virus
Genomes & Genes
Proteins & Domains
Identified ORFs
Results & Discussion
Acknowledgement
Contact us

Project Developed by;
Pankaj Kr. Agarwal
B.E. (Biotechnology)
Dept. of Biotechnology
SEC Sikar, Rajasthan.
INDIA

email:
pankajbt@gmail.com

Results & Discussion

Genome information

Organism Name

Genes

Size

GC%

Protein

Apple Mosaic Virus RNA1

1

3476nt

45%

Methyltransferase, Helicase protein

Apple Mosaic Virus RNA2

1

2979nt

43%

RNA dependent RNA polymerase protein

Apple Mosaic Virus RNA3

2

2056nt

45%

Cell to cell movement and coat protein

Apple Chlorotic Leaf Spot Virus P863

3

7555nt

41%

It encodes for three protein that are replicase, movement protein and coat protein

For Analyzed Results Click below

ORF Finder Results (Tool Used NCBI-ORF Finder)

Blast Results (BLASTP)

Domain Results (Prosite & CDD)

Multiple Alignment Results (ClustalW)

Secondary Structure Prediction Results (GOR Method)

Probable 3D Protein Structures (Homology Modeling; Modeller 9V3)

Conclusion

References


 
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