Comparative Genome Analysis and Development of Database System
for Apple Mosaic Virus; RNA1, RNA2, RNA3
and
Apple Chlorotic Leaf Spot Virus strain P863
Home Page
Apple Mosaic Virus
Apple Chlorotic leaf Spot Virus
Genomes & Genes
Proteins & Domains
Identified ORFs
Results & Discussion
Acknowledgement
Contact us

Project Developed by;
Pankaj Kr. Agarwal
B.E. (Biotechnology)
Dept. of Biotechnology
SEC Sikar, Rajasthan.
INDIA

email:
pankajbt@gmail.com

Domain Results

Showing Apple chlorotic leaf spot virus P863 Results

ORF ID

Domain Name

Coordinate

PROSITE ID

CDD ID

Aclsv4.1

RNA dependent RNA polymerase

1633 - 1740

PS50507

00978

Aclsv4.2

Viral movement protein (MP)

7 - 202

-

01107

Aclsv4.3

coat protein

58 - 250

-

05892

Aclsv4.4

Not found

-

-

 

Aclsv4.5

Not found

-

-

 

Aclsv4.6

Not found

-

-

 

Aclsv4.7

Not found

-

-

 

Aclsv4.8

Not found

-

-

 

Aclsv4.9

Not found

-

 

 

Aclsv4.10

Not found

-

-

 

Aclsv4.11

Not found

-

-

 

Aclsv4.12

Not found

-

-

 

Aclsv4.13

Not found

-

-

 

Aclsv4.14

Not found

-

-

 

Aclsv4.15

Not found

-

-

 

Aclsv4.16

Not found

-

-

 

Aclsv4.17

Not found

-

-

 

Aclsv4.18

Not found

-

-

 

Aclsv4.19

Not found

-

-

 

Aclsv4.20

Not found

-

-

 

Aclsv4.21

Not found

-

-

 

Aclsv4.22

Not found

-

-

 

Aclsv4.23

Not found

-

-

 

Aclsv4.24

Prokaryotic membrane lipoprotein

1 - 20

PS51257

-

Aclsv4.25

Not found

-

-

 

Aclsv4.26

Not found

-

-

 

Aclsv4.27

Not found

-

-

 

Aclsv4.28

Not found

-

-

 

Aclsv4.29

Not found

-

-

 

Aclsv4.30

Not found

-

-

 

Aclsv4.31

Not found

-

-

 

Aclsv4.32

Not found

-

-

 

Aclsv4.33

Not found

-

-

 
 

       Showing Apple mosaic virus RNA1 Results

ORF ID

Domain Name

Coordinate

PROSITE ID

CDD ID

Apmvrna1.1

1. Viral methyltransferase

2. Viral RNA helicase

1. 46 – 419

2. 755 - 1011

-

1.    01660

2.   01443

Apmvrna1.2

Not found

-

-

-

Apmvrna1.3

Not found

-

-

-

Apmvrna1.4

Not found

-

-

-

Apmvrna1.5

Not found

-

-

-

Apmvrna1.6

Not found

-

-

-

Apmvrna1.7

Not found

-

-

-

Apmvrna1.8

Not found

-

-

-

Apmvrna1.9

Not found

-

-

-

Apmvrna1.10

Not found

-

 

-

Apmvrna1.11

Not found

-

-

-

Apmvrna1.12

Not found

-

-

-

Apmvrna1.13

Not found

-

-

-

Apmvrna1.14

Not found

-

-

-

Apmvrna1.15

Not found

-

-

-

Apmvrna1.16

Not found

 

-

-

Apmvrna1.17

Not found

-

-

-

Apmvrna1.18

Not found

-

-

-

Apmvrna1.19

Not found

-

-

-

Apmvrna1.20

Not found

-

-

-

Showing Apple mosaic virus RNA2 Results

ORF ID

Domain Name

Coordinate

PROSITE ID

CDD ID

Apmvrna2.1

RNA dependent RNA polymerase

569 – 684,

363 - 797

PS50507

00978

Apmvrna2.2

Not found

-

-

-

Apmvrna2.3

Not found

-

-

-

Apmvrna2.4

Not found

-

-

-

Apmvrna2.5

Not found

-

-

-

Apmvrna2.6

Not found

-

-

-

Apmvrna2.7

Not found

-

-

-

Apmvrna2.8

Not found

-

-

-

Apmvrna2.9

Not found

-

-

-

Showing Apple mosaic virus RNA3 Results

ORF ID

Domain Name

Coordinate

PROSITE ID

CDD ID

Apmvrna3.1

movement protein

9 - 282

-

01573

Apmvrna3.2

coat protein

19 - 217

-

01787

Apmvrna3.3

-

-

-

-

Apmvrna3.4

-

-

-

-

Apmvrna3.5

-

-

-

-

Apmvrna3.6

-

-

-

-

Apmvrna3.7

-

-

-

-

Apmvrna3.8

-

-

-

-

Apmvrna3.9

-

-

-

-

Apmvrna3.10

-

-

-

-

Apmvrna3.11

-

-

-

-

Apmvrna3.12

-

-

-

-

Apmvrna3.13

-

-

 

-

Apmvrna3.14

-

-

-

-
 
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