Comparative Genome Analysis and Development of Database System
for Apple Mosaic Virus; RNA1, RNA2, RNA3
and
Apple Chlorotic Leaf Spot Virus strain P863

Home Page
Apple Mosaic Virus
Apple Chlorotic leaf Spot Virus
Genomes & Genes
Proteins & Domains
Identified ORFs
Results & Discussion
Acknowledgement
Contact us

Project Developed by;
Pankaj Kr. Agarwal
B.E. (Biotechnology)
Dept. of Biotechnology
SEC Sikar, Rajasthan.
INDIA

email:
pankajbt@gmail.com

References

1)                  P. J. Shiel and P. H. Berger 2000. The complete nucleotide sequence of apple mosaic virus (ApMV) RNA 1 and RNA 2: ApMV is more closely related to alfalfa mosaic virus than to other Ilarvirus. Journal of General Virology (2000), 81, 273–278.

2)                  J. A. Sdnchez-Navarro and V. Pallds 1994. Nucleotide sequence of apple mosaic Ilarvirus RNA 4. Journal of General Virology (1994), 75, 1441 1445.

3)                  K. Sato, N. Yoshikawa and T. Takahashi 1993. Complete nucleotide sequence of the genome of an apple isolate of apple chlorotic leaf spot virus. Journal of General Virology (1993), 74, 1927-1931.

4)                  By N. YOSHIKAWA AND T. TAKAHASHI 1989. In vitro Translation of Apple Chlorotic Leaf Spot Virus RNA. J. gen. Virol. (1989), 70, 3051-3054.

5)                  Kaoru Sato, ~ Nobuyuki Yoshikawa, Tsuyoshi Takahashi I and Hideharu Taira 2 1995. Expression, subcellular location and modification of the 50 kDa protein encoded by ORF2 of the apple chlorotic leaf spot trichovirus genome. Journal of General Virology (1995), 76, 1503-1507.

6)                  Masamichi Isogai and Nobuyuki Yoshikawa 2005. Mapping the RNA-binding domain on the Apple chlorotic leaf spot virus movement protein. Journal of General Virology (2005), 86, 225–229.

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13)              N. Eswar, M. A. Marti-Renom, B. Webb, M. S. Madhusudhan, D. Eramian, M. Shen, U. Pieper, A. Sali. Comparative Protein Structure Modeling With MODELLER. Current Protocols in Bioinformatics, John Wiley & Sons, Inc., Supplement 15, 5.6.1-5.6.30, 200.

14)              M.A. Marti-Renom, A. Stuart, A. Fiser, R. Sánchez, F. Melo, A. Sali. Comparative protein structure modeling of genes and genomes. Annu. Rev. Biophys. Biomol. Struct. 29, 291-325, 2000.

15)              A. Sali & T.L. Blundell. Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 234, 779-815, 1993.

16)              A. Fiser, R.K. Do, & A. Sali. Modeling of loops in protein structures, Protein Science 9. 1753-1773, 2000.

17)               Guex N, Diemand A and Peitsch MC (1999) Protein modelling for all. TiBS 24:364-367.

18)              Posnette, A. F. and Cropley, R. 1956. Apple mosaic viruses. Host reaction and strain interference. Journal of Horticultural Science 31:119-133.

19)              Mirosława Cieślińska1, Aneliya Borisova and Beata Komorowska 2007. some molecular properties of several isolates of apple chlorotic leaf spot virus from Bulgaria. Journal of Fruit and Ornamental Plant Research Vol. 15, 2007: 125-131.

20)              M. Isogai, Y. Saitou, N. Takahashi, T. Itabashi, M. Terada, H. Satoh, and N. Yoshikawa. The 50-kDa Protein of Apple chlorotic leaf spot virus Interferes with Intracellular and Intercellular Targeting and Tubule-Inducing Activity of the 39-kDa Protein of Grapevine berry inner necrosis virus. MPMI Vol. 16, No. 3, 2003, pp. 188–195.


 
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